Equipment – Microscopes & Workstations

General Categories

For a detailed table with instrument specifications, look here: Spreadsheet table view of all MIC equipment. Note: recharge rates are most up-to-date on iLabs and non-UC rates are 2X the UC rate. Contact us with questions or specific imaging needs.

For instrument scheduling: MIC iLabs page

CONFOCAL & MULTI-PHOTON LASER SCANNING MICROSCOPES

Zeiss LSM 980 NLO with Airyscan and Becker-Hickl TCSPC FLIM (K)

– Ultra-sensitive, inverted laser scanning confocal with 1-photon and 2-photon imaging, with GaAsP detectors
– Airyscan-2 super-resolution technology with Multiplex Mode
– Becker-Hickl Time-correlated single photon counting fluorescence lifetime imaging
– FCS (coming soon)
– full incubation (heating & CO2)

Trinity

Zeiss LSM 880 NLO AxioExaminer with Airyscan and Coherent Chameleon Vision (Trinity)

– Ultra-sensitive, upright laser scanning confocal with 1-photon and 2-photon imaging, GaAsP detectors, 34-channel spectral imaging
– Airyscan super-resolution technology, up to 1.7-fold better resolution than standard scanning confocal microscopes
– Large motorized stage for combined electrophysiology and imaging
– 20X CLARITY objective in addition to standard objectives

NeoZeiss LSM 880 NLO AxioExaminer with Coherent Chameleon MPX OPO (Neo)

– Ultra-sensitive, upright confocal imaging with large motorized fixed stage
– 2-photon imaging from 700-1300 nm
– Visible lasers: 405, 458, 488, 514, 561, 591, 633nm

Rachel copyZeiss LSM 780 AxioExaminer with Spectra-Physics Maitai (Rachel)

– Ultra-sensitive, upright confocal featuring 2-photon imaging with GaAsP detectors
– 34-channel spectral system with imaging in the visible range from 400-700nm; visible lasers: 405, 488, 514, 561, 633nm
– Large fixed stage for combined electrophysiology and imaging

Optimus copyZeiss LSM 990 AxioObserver (Rodimus Prime)

– Inverted laser scanning confocal
– Motorized XY-stage for tile scan and multi-position experiments
– Live cell imaging capabilities: full incubation chamber with temperature, CO2 control and heated stage
– Lasers: 405, 458, 488, 514, 561, 591, 633nm

MF

 

EPIFLUORESCENCE & BRIGHTFIELD MICROSCOPES
BayMax copy

Zeiss Axio Scan.Z1 Slide Scanner(Baymax)

– 100-slide automated slide scanner for fluorescence or IHC
– Filter cubes for: DAPI, eGFP, Cy3, mPlum, Cy5
– Slide scanning service available


Stay Puft copy

Zeiss Axio Scan 7 Slide Scanner(Stay Puft)

-100-slide automated slide scanner for fluorescence or IHC
-Filter cubes for:  
-Slide scanner service available


Echo Revolve (Bender)

Brightfield and fluorescence microscope which can revolve to become either an upright microscope or an inverted microscope. It has 4x, 10x and 20x air objectives.  It’s super easy to use, runs on an iPad, and can be used for checking your brightfield stains or fluorescence signals prior to slide scanning or confocal imaging!

 

Herzmark copyNikon Widefield Epifluorescent Microscope (The Herzmark)

– Inverted compound microscope with DIC optics
– Incubation chamber, motorized stage, and Nikon PerfectFocus
– Filters: DAPI, eGFP, Rhodamine, Cy5 (?)

 

Zoom copyZeiss AxioZoom v16 FL (Zoom)

– Macro scope with 16x motorized zoom, fluorescence, BF transmitted or reflected light
– Motorized XY-stage, ideal for multi-position or tiling
– Fluorescent illumination with the following filter cubes: DAPI, eCFP, eGFP, eYFP,  and mCherry

Johnny5 copyLeica M205 Fluorescent Stereoscope (Johnny-5)

– Fluorescent stereoscope ideal for screening and dissections
– Filter cubes: CFP, GFP, YFP, and DS-Red
Not equipped with a camera – for screening only.


 

SPINNING DISK CONFOCAL MICROSCOPES

Nikon Spinning Disk Confocal (Wall-E)

– Inverted Yokogawa spinning disk confocal microscope for live cell imaging
– Nikon PerfectFocus
– Lasers: 405, 488, 561, and 637nm
– Full incubation enclosure with CO2, humidity, and heating
– Motorized XY stage

 

Enterprise copy3i Spinning Disc Confocal with SLM (Enterprise)

– Upright spinning disk confocal microscope with spatial light modulator (SLM)
– Large platform, Sutter-motorized XY-stage for electrophysiology
– Ideal for zebrafish, Drosophila, and brain slice work with 1-photon or 2-photon holographic stimulation

Max copyNikon/Andor Spinning Disk Confocal (Max)

– Inverted spinning disk confocal with a motorized XY-stage and Nikon PerfectFocus
– Full enclosure incubation chamber for humidity, CO2 and temperature control for live cell imaging.
– Andor Clara and Andor iXon cameras

 

LIGHTSHEET MICROSCOPES

New: Bruker TruLive 3D Imager (C-3PO)

TruLive 3D Imager

The Bruker Luxendo TruLive3D Imager is optimized for fast 3D multi-sample volume imaging of delicate live specimens in their native 3D environment. Thus, it is particularly well-suited for time-lapse and high-throughput imaging of 3D spheroids, organoids, 3D cell cultures, and small embryos. Using an optical concept, with dual-sided illumination and single-lens detection from below, enables fast acquisition speed, high-resolution imaging, and minimal shadowing effects.

More information coming soon!


Morpheus copy
Zeiss LightSheet.Z1 CLEARING (Morpheus)

  • Selective Plane Illumination Microscopy (SPIM)
  • Setup for water-based or cleared tissue imaging
  • 5X water or cleared samples
  • 20X water
  • 40X water
  • Lasers: 405, 445, 488, 515, 561, 642nm
  • Filters: DAPI, eGFP,  TexRed, Far-red, CFP, YFP, mCherry

 

cleared ovary imaged in the lightsheet Z1

Zeiss LightSheet.Z1 (Serenity)

Selective Plane Illumination Microscopy (SPIM)

  • Setup for water-based or cleared tissue imaging
  • 5X water or cleared samples
  • 20X water
  • Lasers: 405, 488, 561, 642nm
  • Filters: DAPI, eGFP, TexRed, Far-red

 

Zeiss Cell Discoverer 7 (Rocinante)

Roci

– Automated inverted microscope for live cell imaging
– Incubation chamber with CO2, temperature and humidity control
– Automated UV decontamination between sessions
– Combined confocal (LSM 900) and widefield microscope
– Objectives (air or water): 5x/0.35 air, 20x/0.7 air (2.2mm WD), 20x/0.95 air, 50x/1.2 water – all with 0.5x, 1x, and 2x tube lens magnification option (i.e., equivalent objective range from 2.5x up to 100x possible)
– Automatic water immersion for 50x water-dipping objective
– Lasers: 405, 488, 561, and 650 nm
– Widefield filters: 425/30 + 514/30 + 592/25 + 709/100, 467/24 + 555/25 + 687/145
– Brightfield: Differential interference contrast (DIC) and phase contrast microscopy
– Slides (up to 3), dishes (35 or 50mm), multi-well plates
– Airyscan 2 super resolution (140 nm resolution)
– Software: Zen Blue 3.2

This tutorial video is a must-watch before you come for training:

Learn more about Rocinante:

 

#Workstation

WORKSTATIONS with IMAGE PROCESSING & ANALYSIS SOFTWARE

DeepThought & Threadripper

– Windows workstations with GPU processor and SSD hard drives for fast processing and rendering
– Software: Bitplane Imaris, Zeiss Zen, FIJI, Matlab, Adobe Suite

 

Morpheus Processing Workstation

– Windows workstation with GPU processor for faster processing and rendering
– Software: arivis Vision4D, Zeiss Zen, FIJI

Serenity Processing Workstation

– Windows workstation processing lightsheet data
– Software: Zeiss Zen, FIJI

 

 

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